mixture of gaussian processes model Search Results


90
Optik GmbH gaussian mixture model
Gaussian Mixture Model, supplied by Optik GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Routledge Ltd stable non-gaussian random processes: stochastic models with infinite variance: stochastic modeling
Stable Non Gaussian Random Processes: Stochastic Models With Infinite Variance: Stochastic Modeling, supplied by Routledge Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Mauna Kea Technologies gaussian process model
Gaussian Process Model, supplied by Mauna Kea Technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Myspace LLC gaussian mixture model
Gaussian Mixture Model, supplied by Myspace LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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GraphPad Software Inc bimodal gaussian mixture model
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Bimodal Gaussian Mixture Model, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Hasegawa Co Ltd gaussian mixture models
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Gaussian Mixture Models, supplied by Hasegawa Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Mauna Kea Technologies ultra-wideband range measurement model with gaussian processes
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Ultra Wideband Range Measurement Model With Gaussian Processes, supplied by Mauna Kea Technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Environmetrics Pty Ltd spatiotemporal clustering using gaussian processes embedded in a mixture model
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Spatiotemporal Clustering Using Gaussian Processes Embedded In A Mixture Model, supplied by Environmetrics Pty Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Baidu Inc gaussian mixture model (gmm)
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Gaussian Mixture Model (Gmm), supplied by Baidu Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Kleijnen Systematic Reviews Ltd gaussian process surrogate models
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Gaussian Process Surrogate Models, supplied by Kleijnen Systematic Reviews Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MultiFit Tiernahrungs gaussian mixture model
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Gaussian Mixture Model, supplied by MultiFit Tiernahrungs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Microsensors Inc gaussian mixture model
GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a <t>Gaussian-mixture</t> model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.
Gaussian Mixture Model, supplied by Microsensors Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a Gaussian-mixture model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.

Journal: RNA Biology

Article Title: Global assessment of GU-rich regulatory content and function in the human transcriptome

doi: 10.4161/rna.8.4.16283

Figure Lengend Snippet: GRE- and ARE-motif effect on mRNA stability Microarray-based mRNA half-life data (see Materials and Methods for details) were stratified according to the experimental condition, transcript type and half-life classification (short vs. long half-lives, based upon a Gaussian-mixture model fit. (A) The histograms of log-2 values (columns) of mRNA half-lives in each gene category (Control, ARE-genes and GRE-genes) were obtained and fitted using a bi-modal Gaussian mixture model (line). The control set represent mRNAs with neither ARE nor GRE. A representative model under the anti-CD3 experimental condition is shown. (B) The fraction of short half-life transcripts out of the total within each stratum. Data are Mean ± SEM and represent fitted parameter uncertainties. For each stimulus, ARE-mRNAs and GRE-mRNAs results were compared with the Control using the unpaired t-test with Bonferroni correction for multiple testing. **p < 0.01 and *p < 0.05. Using the 2-way ANOVA test, the effect of the motif (Control, ARE+ or GRE+) was found to be significant at p < 0.01. (C) A simpler classification scheme based on the arbitrary cutoff of 64 (26) minutes to classify short and long half-life transcripts yields essentially the same results as in (A). (D) The proportions of control mRNAs, ARE-mRNAs and GRE-mRNAs that do not change their stability patterns (non-switching class). p < 0.001 using chi-square analysis.

Article Snippet: We proceeded to estimate the ratio of the short set to the long set by fitting the histogram data with a bimodal Gaussian Mixture model using GraphPad Prism software functions.

Techniques: Microarray, Control